BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004C04LP1|AL425236
(909 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1508 1739 0.0
>3x_Contig1508
Length = 7899
Score = 1739 bits (876), Expect = 0.0
Identities = 905/912 (99%), Gaps = 3/912 (0%)
Strand = Plus / Minus
Query: 1 gattaacatactcaccaattgacttgagttatgttttaggtgaagactataagaaagatg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3274 gattaacatactcaccaattgacttgagtgatgttttaggtgaagactataagaaagatg 3215
Query: 61 aagaaagcaaagatcaagtcttagaaaaakcgtccaaattgatagaagacagaatcgccg 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 3214 aagaaagcaaagatcaagtcttagaaaaagcgtccaaattgatagaagacagaatcgccg 3155
Query: 121 aggctaaacttgttaacaccgaag-tttcgtttggtccaaggatgcaaagaagtttaact 179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3154 aggctaaacttgttaacaccgaaggtttcgtttggtccaaggatgcaaagaagtttaact 3095
Query: 180 ctattgttggaccaaacggtagaaatatcagagaaatcagaaatgccactaaaactgtta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3094 ctattgttggaccaaacggtagaaatatcagagaaatcagaaatgccactaaaactgtta 3035
Query: 240 tccatgttccaagaaaaagcgataaggttaacaatgttatatatgtcctaggctctgaag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3034 tccatgttccaagaaaaagcgataaggttaacaatgttatatatgtcctaggctctgaag 2975
Query: 300 aaggtgtgaaaaaggcagctgaattgatctgcaagagattaaaatagttttaatgttttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2974 aaggtgtgaaaaaggcagctgaattgatctgcaagagattaaaatagttttaatgttttc 2915
Query: 360 actttgtccgttcctttgatccaattcttgtatttatttcctctattggtgttcaacgct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2914 actttgtccgttcctttgatccaattcttgtatttatttcctctattggtgttcaacgct 2855
Query: 420 gcacagattagcactacataagcttacattaataccacataattaatcatgtatactgaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854 gcacagattagcactacataagcttacattaataccacataattaatcatgtatactgaa 2795
Query: 480 tacacttaaaacctatatcaaaaaatgtaaacaaaactatttcttcaaaatcctcggttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2794 tacacttaaaacctatatcaaaaaatgtaaacaaaactatttcttcaaaatcctcggttg 2735
Query: 540 ttcctcaatgttaaagatttatacgggctagcgtgtgtttcatggttatacgtaaacgta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2734 ttcctcaatgttaaagatttatacgggctagcgtgtgtttcatggttatacgtaaacgta 2675
Query: 600 tatatatatttattgtggcctgaagatctatatgcaggcatacgaataaagccgtcttca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2674 tatatatatttattgtggcctgaagatctatatgcaggcatacgaataaagccgtcttca 2615
Query: 660 tgagcaacaagactgtgaatcatttgtacttggtctttgcaatgatatattattattatt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2614 tgagcaacaagactgtgaatcatttgtacttggtctttgcaatgatatattattattatt 2555
Query: 720 aggtttcttcgattcctgtatcttatctttgttctgcaaatataatctttcaccaatatc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2554 aggtttcttcgattcctgtatcttatctttgttctgcaaatataatctttcaccaatatc 2495
Query: 780 ttggaagactttgattacgttttctccagtcttagcactgacctggtggaacaacaaatt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2494 ttggaagactttgattacgttttctccagtcttagcactgacctggtggaacaacaaatt 2435
Query: 840 attctcttgtgc-aactcgcgtgcgtgcgcttcatcgactaaagaggtcgatt-ccyttc 897
|||||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 2434 attctcttgtgcaaactcgcgtgcgtccgcttcatcgactaaagaggtcgattccctttc 2375
Query: 898 agatactagatc 909
||||||||||||
Sbjct: 2374 agatactagatc 2363
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,973
Number of Sequences: 1807
Number of extensions: 10973
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 1
length of query: 909
length of database: 10,358,551
effective HSP length: 16
effective length of query: 893
effective length of database: 10,329,639
effective search space: 9224367627
effective search space used: 9224367627
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)